Ready for BioData Management? Intensive at CIIMAR
from
Thursday 3 July 2025 (09:30)
to
Friday 4 July 2025 (18:00)
Monday 30 June 2025
Tuesday 1 July 2025
Wednesday 2 July 2025
Thursday 3 July 2025
09:30
Introduction to RDM
-
Daniel Faria
(
Instituto Superior Técnico
)
Introduction to RDM
Daniel Faria
(
Instituto Superior Técnico
)
09:30 - 10:45
Interactive presentation motivating and introducing RDM
10:45
Coffee Break
Coffee Break
10:45 - 11:00
11:00
Data Collection Overview
-
Daniel Faria
(
Instituto Superior Técnico
)
Data Collection Overview
Daniel Faria
(
Instituto Superior Técnico
)
11:00 - 11:30
Discussion of the key issues at the stage of data collection
11:30
Data Collection Hands-On
-
Gil Poiares Oliveira
(
BioData.pt
)
Data Collection Hands-On
Gil Poiares Oliveira
(
BioData.pt
)
11:30 - 13:00
Group exercise on the electronic lab notebook eLabFTW
13:00
Lunch Break
Lunch Break
13:00 - 14:00
14:00
Data Processing & Analysis Overview
-
Daniel Faria
(
Instituto Superior Técnico
)
Data Processing & Analysis Overview
Daniel Faria
(
Instituto Superior Técnico
)
14:00 - 14:30
Discussion of the key issues at the stages of data processing and analysis
14:30
Data Processing & Analysis Hands-On
-
Jorge dos Santos Oliveira
(
IST
)
Data Processing & Analysis Hands-On
Jorge dos Santos Oliveira
(
IST
)
14:30 - 16:00
Group exercise on the workflow platform Galaxy
16:00
Wrap Up
-
Daniel Faria
(
Instituto Superior Técnico
)
Gil Poiares Oliveira
(
BioData.pt
)
Jorge dos Santos Oliveira
(
IST
)
Wrap Up
Daniel Faria
(
Instituto Superior Técnico
)
Gil Poiares Oliveira
(
BioData.pt
)
Jorge dos Santos Oliveira
(
IST
)
16:00 - 16:30
Friday 4 July 2025
09:30
Quick Recap / Intro
-
Daniel Faria
(
Instituto Superior Técnico
)
Quick Recap / Intro
Daniel Faria
(
Instituto Superior Técnico
)
09:30 - 09:45
Short summary of day 1 and introduction to day 2
09:45
Data Preservation Overview
-
Daniel Faria
(
Instituto Superior Técnico
)
Data Preservation Overview
Daniel Faria
(
Instituto Superior Técnico
)
09:45 - 10:15
Discussion of the key issues at the stage of data preservation
10:15
Data Storage Hands-On
-
Jorge dos Santos Oliveira
(
IST
)
Data Storage Hands-On
Jorge dos Santos Oliveira
(
IST
)
10:15 - 10:45
Quick group exercise on the storage-cost estimation tool of the DSW
10:45
Coffee Break
Coffee Break
10:45 - 11:00
11:00
Data Sharing & Reuse Overview
-
Daniel Faria
(
Instituto Superior Técnico
)
Data Sharing & Reuse Overview
Daniel Faria
(
Instituto Superior Técnico
)
11:00 - 11:30
Discussion of the key issues at the stages of data sharing and reuse
11:30
Data Sharing & Reuse Hands-On
-
Gil Poiares Oliveira
(
BioData.pt
)
Data Sharing & Reuse Hands-On
Gil Poiares Oliveira
(
BioData.pt
)
11:30 - 13:00
Group exercise on the DMPortal, an instance of Dataverse
13:00
Lunch Break
Lunch Break
13:00 - 14:00
14:00
Data Management Planning Overview
-
Daniel Faria
(
Instituto Superior Técnico
)
Data Management Planning Overview
Daniel Faria
(
Instituto Superior Técnico
)
14:00 - 14:30
Discussion of the key issues at the stage of planning
14:30
Data Management Planning Hands-On
-
Jorge dos Santos Oliveira
(
IST
)
Data Management Planning Hands-On
Jorge dos Santos Oliveira
(
IST
)
14:30 - 16:00
Group exercise on the Data Stewardship Wizard (DSW)
16:00
Wrap Up
-
Daniel Faria
(
Instituto Superior Técnico
)
Jorge dos Santos Oliveira
(
IST
)
Gil Poiares Oliveira
(
BioData.pt
)
Wrap Up
Daniel Faria
(
Instituto Superior Técnico
)
Jorge dos Santos Oliveira
(
IST
)
Gil Poiares Oliveira
(
BioData.pt
)
16:00 - 16:30
Quick discussion of the course’s lessons